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ERX12099387: Embryo methylation profiling in marmosets
2 ILLUMINA (Illumina HiSeq 4000) runs: 31.1M spots, 4.7G bases, 2Gb downloads

Design: Embryo methylation profiling in marmosets
Submitted by: EBI (European Bioinformatics Institute)
Study: Embryo methylation profiling in marmosets
PRJEB73611 • ERP158382 • All experiments • All runs
show Abstracthide Abstract
Here we perform Bisulfite sequencing (BS-seq) on marmoset post-implantation embryos following laser capture micro dissection to capture methylation profiles of post-implantation tissues. We also perform single-cell BS-seq on pre-implantation marmoset embryos from four-cell to the compacted morula stages.
Sample: CME25A7659629_1.fastq.gz
SAMEA115381560 • ERS18401080 • All experiments • All runs
Organism: Callithrix jacchus
Library:
Name: CME25A7659629_1.fastq.gz_s
Instrument: Illumina HiSeq 4000
Strategy: Bisulfite-Seq
Source: GENOMIC SINGLE CELL
Selection: RANDOM
Layout: SINGLE
Construction protocol: Single cell or near single cell genome bisulfite sequencing was conducted on postimplantation embryos following laser capture micro-dissection. Single cell bisulfites sequencing was conducted on pre-implantation following isolation via mouth pipetting. Genomic DNA was extracted using a Monarch Genomic DNA Purification Kit (NEB). Standard library construction protocols were used.
Runs: 2 runs, 31.1M spots, 4.7G bases, 2Gb
Run# of Spots# of BasesSizePublished
ERR1272515815,560,8072.3G1,008.3Mb2024-09-22
ERR1272515715,560,8072.3G1,010.4Mb2024-09-23

ID:
35317230

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